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What are peptide bonds?
Peptide bonds are covalent bonds that link amino acids together in a protein chain. They are formed through a condensation reaction between the carboxyl group of one amino acid and the amino group of another amino acid, resulting in the release of a water molecule. Peptide bonds are crucial for maintaining the structure and function of proteins, as they determine the sequence of amino acids in a protein chain.
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What is correct: peptide bond?
A peptide bond is a covalent bond that forms between the carboxyl group of one amino acid and the amino group of another amino acid during protein synthesis. This bond is formed through a condensation reaction, where a molecule of water is removed. The resulting bond is a strong and stable linkage that holds the amino acids together in a protein chain. Therefore, the correct term is "peptide bond" to describe this specific type of covalent bond between amino acids.
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What is a peptide bond, peptide chain, peptide group, di-, tri-, and polypeptide? Can you please explain this briefly and simply? Thank you.
A peptide bond is a chemical bond that forms between the carboxyl group of one amino acid and the amino group of another amino acid. When multiple amino acids are linked together by peptide bonds, they form a peptide chain. A peptide group refers to a group of amino acids linked together by peptide bonds. A dipeptide is a chain of two amino acids, a tripeptide has three amino acids, and a polypeptide is a chain of many amino acids linked together. These chains of amino acids are the building blocks of proteins.
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Why are peptide bonds not freely rotatable?
Peptide bonds are not freely rotatable because of the partial double bond character that arises from resonance in the peptide bond. This restricts the rotation around the bond and locks the peptide backbone into a planar structure. The resonance forms a rigid, flat structure that allows for the formation of the alpha helix and beta sheet secondary structures in proteins. This rigidity is essential for maintaining the specific three-dimensional shape and function of proteins.
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How does hydrolysis occur during peptide cleavage?
Hydrolysis occurs during peptide cleavage when a water molecule is used to break the bond between the carboxyl group of one amino acid and the amino group of another. This process involves the addition of a water molecule to the peptide bond, resulting in the separation of the two amino acids. The water molecule donates a hydrogen ion to one amino acid and a hydroxide ion to the other, causing the bond to break and the peptide to be cleaved. This hydrolysis reaction is catalyzed by enzymes called proteases, which facilitate the cleavage of peptides in biological systems.
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What is the stability of peptide bonds?
Peptide bonds are relatively stable under normal physiological conditions. They are formed through a condensation reaction between the carboxyl group of one amino acid and the amino group of another, resulting in the release of a water molecule. This covalent bond is strong and resistant to hydrolysis, making it stable in the presence of water. However, under extreme conditions such as high temperature or strong acids or bases, peptide bonds can be hydrolyzed, leading to the breakdown of the peptide chain.
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How does one go from DNA to peptide?
The process of going from DNA to peptide involves several steps. First, the DNA sequence is transcribed into messenger RNA (mRNA) by the enzyme RNA polymerase. The mRNA is then translated by ribosomes, which read the mRNA sequence in groups of three nucleotides called codons. Each codon corresponds to a specific amino acid, which is the building block of a peptide. As the ribosome reads the mRNA, it links together the corresponding amino acids to form a peptide chain. This chain of amino acids folds into a specific three-dimensional structure to form a functional peptide.
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How can one recognize mesomerically stabilized peptide bonds?
Mesomerically stabilized peptide bonds can be recognized by the presence of resonance structures in the peptide bond. This is typically observed when the peptide bond is part of a conjugated system, such as in the case of proline or in the presence of aromatic amino acids like phenylalanine or tyrosine. The presence of resonance structures indicates that the electrons in the peptide bond are delocalized, leading to increased stability. Additionally, mesomerically stabilized peptide bonds may exhibit altered reactivity compared to non-stabilized peptide bonds, making them important in the study of protein structure and function.
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